Results for "NGS analysis"
Top-level pages
List of bioinformatics open source projects/software.
...b/Software.html Metagenomics analysis software Anduril http://www...d workflow framework for data analysis Armadillo workflow platform...cess to more than 150 genomic analysis tools GeWorkbench http://wi...omkappa/ PromKappa (Promoter analysis by Kappa) software program us...3810 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...tes/?source=navbarGASP Genometric Analysis Simulation Program. A so...der more flexible and useful settings. If you need models with more than...individual-based program for the analysis of quantitative traits with e...on model for population viability analysis (PVA). http://www.vortex9.org...3791 days ago
List of In-silico Binding Site Prediction Tools
...onal surfaces identified by shape analysis. In this relational data...e also available enabling further analysis. PROSURFER: http://163.43.14...otein structure visualization and analysis but has been used more often...tein structure and their both endings are opened to the surrounding solv...3798 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bioinformatic...of code and they do one thing really well. These things include changing line spacing..., @ascii)'#converts ascii values into character strings.perl...3682 days ago
Next generation sequencing in R or bioconductor environment
...and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from...functions provided by Biostrings form the basis for many other sequence analysis packages. Documentation...of RNA-Seq experiments is the analysis of splice junctions. The foll...3678 days ago
Commercial and public next-gen-seq (NGS) software
...bsp;- Commercial software for NGS, microarray, and qPCR data analysis. Streamlined analysis wo...e genomes, and carry out post-analysis. ZOOM is developed to be high...pecifically optimized for the analysis of large numbers (millions) o...ersity of California, BerkeleyNGS-Trex: Next Generation Sequencing T...3573 days ago
- Since few years miRNA has shown to play important role...d tools related with miRNA: miRNA Sequencing data analysis : http://tools.genxpro.n...ww.illumina.com/applications/epigenetics/small_rna_analysis.ilmn More: http://www.bioco...
3550 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening and analysis of DNA sequencing files - ab1...first android app that allows for the opening and analysis of DNA sequencing files - ab1...3595 days ago
- Pathway Analysis is usually performed with aim to en...mechanisms pursue by genes. Pathway Analysis is not only limited to what b...croarrayCourse/Lectures09/Pathway%20Analysis.pdf http://gettinggeneticsdo...help/search/index.html?q=Enrichment+analysis+
3550 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly t... biologists need to perform some basic analysis: load a table, plot som...reated to perform application specific tasks. e.g. analysis of microarray experiments and...3415 days ago
