Results for "miRNA target gene"
Top-level pages
Best book Titles for Learning Bionformatics
Nothing can add to our intellect mor...O'Reilly Bioinformatics for Geneticists, Michael Barnes, Ian C...ical Guide to the Analysis of Genes and Proteins, Second Edition...er Jambeck, 2001, O'Reilly General Genomics Functional Mic...2001, Marcel Dekker Pharmacogenetics and Pharmcogenomics: Rece...3945 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative genetics in plants. Jiménez-G...ic Acids Res, 2012 Full Text Targeted RNA sequencing reveals th...blisher Website Differential gene and transcript expression ana...framework for analyzing next-generation DNA sequencing data. Mc...3807 days ago
List of bioinformatics open source projects/software.
Open source software is software tha...designing and executing phylogenetic workflows AutoDock http:...Prot KB(Swiss-Prot + TrEMBL), Gene Ontology (GO), UniRef (50,90,...and data integration system GenePattern http://www.broadinsti...rver Bioinformatics and phylogenetics webserver (NJ, PhyML, RAx...3784 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/...ss/CDPOP CDPOP is a landscape genetics tool for simulating the emergence of spatial genetic structure in populations r...ulates interactions among two genetic and one environmental fact...sequence evolution along phylogenetic trees. http://tree.bio.ed....3765 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico...ance thresholds used for each target, have often been required to...ested using common subsets of targets, the predictions from FunFOL...es with the query protein and generates structure-based alignmen...ngle frame or multiple frames generated by molecular dynamics (M...3772 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing dat..."; print map { int(rand($max-$min))+$min } 1..$n' #Generates 10 random numbers betwee...,”0”..”9”)[rand 36] } 1..8'#Generates a 8 character password f...3656 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of th...rieve the sequences around peaks, obtain enriched Gene Ontology (GO) terms, find the nearest gene, exon, miRNA or custom features such as m...3652 days ago
Commercial and public next-gen-seq (NGS) software
...Integrated Solutions for Next Generation Sequencing data analysis...tool and produce others. NextGENe - de novo and reference assembl...eq, DNA-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expression, Copy Number, All...alization Tool. It provides a generic platform for manipulating,...3547 days ago
- ...delberg.de/apps/zmf/mirwalk/ TargetScanHuman : http://www.targetscan.org/ RNAhybrid : ht...rv.watson.ibm.com/rna22.html miRNA predictor : http://www.mi...ction.html Idea of analysing miRNA Sequencing data : http://www.illumina.com/applications/epigenetics/small_rna_analysis.ilmn...
3524 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is...s?id=bii.seqdatreader&hl=en BioGene:iPhone/iPad BioGene is an information tool for bi...d viewer. Key Features: Look up genes by symbol or description. G...ges. Key features: Search using gene name or keywords Browse by f...3569 days ago
