Results for "CA"
Top-level pages
...ent formats. It supports, and can inter-convert: fastq fasta fasta+qual sam scarf (an old Illumina format) ba...500 megabytes per second, and can accept streams from standard...been gradually expanded, and can now perform various other fu...he left and right ends and discard reads shorter than 50bp aft...2732 days ago
- ...to see perimissions, size, an modification date ls...te or update file cat file — output the cont...whereis app — show possible locations of app ...in real system locate file — find all insta...
2892 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
...t, it performs enrichment analysis in real-time (v1.1 and above) by accessing source databases. With command-line versions of tools, as you know you can run multiple gene list simul...2890 days ago
- .../gist.githubusercontent.com/santhilalsubhash/1e7cca357e52a181dc25/raw/cfb803e0790...nerated two files1) Transcript wise chromosome location with information about tr...TF_enst_annotation.txt)2) Gene wise chromosome location with information about ge...
2124 days ago
- ...of a raw sequence read to a location within a reference genome. The mapping occurs because the sequences within the r...probability of 10-0 = 1, indicating extremely high probabilit...pile up at the same genomic location. For example, 30X read-de...
2887 days ago
Genome Assembly Tools and Software - PART1 !!
...data structure for this usage can be predominantly classified into two categories: string-based model a...nd mutation detection. COCACOLA – Binning Metagenom...ensive annotation and quantification of transcriptomes are out...implemented using MPI and is capable of assembling larger gen...2704 days ago
Source Code and Pseudo Code !!
...do," and the "for," while the case-type statement is satisfied...tty While not EOF do: Scan over blanks and white space...new char set can't be ascending flag to 1...**** INDENTATION is critically important in Source Code....2677 days ago
Perl Special Vars Quick Reference
...$<digit> Regexp parenthetical capture holders. $& La...RE_TRIE_MAXBUF} Control memory allocations for RE optimizations for.... Status code of most recent system call or pipe. $! Operating...rray and substr first element (Deprecated!). See ...2662 days ago
Quick next generation sequencing (NGS) terms definition
...in the absence of structural variants, mapping locations of the paired ends span...egions, therefore the fragment size distribution can be learned empirically for e...ead-pair signature.split reads: a read that can only be mapped to the refere...2540 days ago
Awesome perl frameworks, libraries and software - PART 1
...Pulled Pork for Snort and Suricata rule management (from Googl...|TheSchwartz|Resque|Redis)/Memcached) PerlRedis/perl-redis&nb...k OpenSource Development Application CaptTofu/DBD-mysql ...or building reusable web-applications lyokato/p5-oauth-lite2&...2507 days ago
