Computational resources for TE discovery and TE detection
...find_ltr http://darwin.informatics.indiana.edu/cgi-bin/evolution/ltr.pl FINDMITE http://jaketu.biochem.vt.edu/dl_software.htm HMMER http:...www.girinst.org/ RepeatFinder http://cbcb.umd.edu/software/RepeatFinder/ Repe...2317 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...s biological contextualization on the set of interesting genes from the data by allowing downstream analysis such as GO and pathway analysis. The product has an option to create pip...2307 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in prokaryotes and single-...893 days ago
Python learning resources for bioinformatics and computational biologist !
...any developers have also used Python to build productivity tools, games, and desk...Muhammad Yasoob Ullah Khalid (1st edition) Introduction to Programming with Pyth...nbsp;(3.x) Python Idioms (PDF) Python in Education (Just fill the fie...2298 days ago
Some useful Bioinformatics links
...tagenomics https://omega.omicsbio.org/ abiswas-odu/Disco: Multi-threaded Distrib...etagenome Assembler https://github.com/abiswas-odu/Disco SAGE: String-overlap As...in R http://zuguang.de/circlize_book/book/introduction.html#a-qiuck-glance Crea...2284 days ago
2260 days ago
Installing Bio::SCF perl module
...to get the right compiler. Modules may have dependencies on other modules (almost always on CPA...iew/710/how-to-install-perl-modules-manually-using-cpan-comman...in -lm... yeschecking for strdup... yesconfigure: creating ./...r/local/include -fPIC -MT scf_dump.o -MD -MP -MF ".deps/scf_du...2261 days ago
Tools to Predict the Impact of Missense Variants !
...as optimized methods of combining tool scores, such as Condel and Logit. Due to the wealth of these metho...uation of these tools is hindered by two types of circularity: they arise due to (1) the same variants or...2246 days ago
Binding Site Prediction in Protein !
...bsp; Identification protein interaction sites. It uses sequence conservation patterns in homologous proteins to distinguish between residues that are conserved due to structural restraints fro...2245 days ago
Protein-Protein Interaction Sites Predictions !
..., medicine and the pharmaceutical industry. PPIs can be investigated...ific protein and the amino acid residues participating in a given PP...meta-PPISP is built on three individual web servers: cons-PPIS...o bind DNA, the method predicts residues that contact DNA using neur...2245 days ago