Short-read assembly using Spades !
If we only had Illumina reads, we could also assemble these using the tool Spades. You can try this here, or try it later on your own data. Get data We will use the same Illumin...882 days ago
663 days ago
Tools for Geospatial data analysis !
Geospatial data is becoming increasingly impo...luding satellite imagery, GPS data, and other forms of spatial d...l analysis. Whether you are a data scientist, GIS specialist, or...s for working with geospatial data, from visualizing and manipul...467 days ago
Bioinformatics tools for genome assembly !
There are numerous genome assembly tools avail...r optimized for short-read sequencing data. SOAPdenovo: A de Bruijn...RCA: A hybrid assembler that combines data from multiple sequencing tech...ach, suitable for PacBio and Nanopore data. Sparc: An assembler des...343 days ago
Mitochondrial genome assembly tools !
Mitochondrial genome assembly tools ar...(mitogenome) from sequencing data, typically obtained through t...from trimmed read sequencing data. MitoHiFi: a python pipeline...s the assembly using the read data. MITOS: MITOS is a web-based...th high-throughput sequencing data. SPAdes: SPAdes (St. Petersb...299 days ago