Results for "NT"
Top-level pages
Awk for Bioinformatician and computational biologist
...l be performed.In the above syntax, either search pattern or a...a.tsv with the following contents: $ cat data/test.tsvcontig1...TGTGTGTGcontig2,ACTTTATATATTcontig3,ACTTATATATATATAcontig4,ACT...nt "";next}{printf $1"\t"}{print $1}' data/test.tsvcontig1 con...2321 days ago
Computational resources for TE discovery and TE detection
...sembly, annotation and alignment has generated increasing interest in developing new method...i.versailles.inra.fr/development/blaster/ Censor h...r http://www.eecs.wsu.edu/~ananth/software.htm MAK http://we....html TE nest http://www.plantgdb.org/prj/TE_nest/TE_nest.ht...2315 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...to analyze their data using a very intuitive workflow for the analys...cludes Transcriptome/ Genome alignment, Differential expression anal...so supports novel discovery like identification of novel genes, exon...and leaves more time for end data interpretation. This webinar will...2305 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms&r...es to gain a gene by HGT, foreign DNA must enter the host nucleus, integrate...ome, and in more complex organisms it must enter the sequestered germline in...891 days ago
Python learning resources for bioinformatics and computational biologist !
...reat for backend web development, data analysis, artificial intelligence, and scientific comp...d applications in Python the antitextbook (3.x) (HTML, PD...to Think Like a Computer Scientist: Learning with Python, Int...iled from StackOverflow documentation (3.x) Python Practice B...2296 days ago
Some useful Bioinformatics links
...free prediction of rearrangement breakpoint reads | Bioinformatics | Oxfo...nopore sequencing reads | Scientific Reports https://www.natu...e optimization platform for synthetic gene design | Bioinforma...s://bmcbioinformatics.biomedcentral.com/articles/10.1186/1471-...2283 days ago
- ...awk '/^>/ {if (seqlen){print seqlen}; print ;seqlen=0;next...e"; done To split bam files into sets with mapped and unmappe...m assembly size from SPAdes contigs.fasta or scaffolds.fasta f...$1)}' | sort | uniq -c To deinterleave interleaved fastq file...
2258 days ago
Installing Bio::SCF perl module
...ecking whether to use vs[n]printf() or s[n]printf()... using v...ecking whether build environment is sane... yeschecking for ga...r/local/include -fPIC -MT fpoint.o -MD -MP -MF ".deps/fpoint.T...‘int’, but argument 3 has type ‘long int&rs...2259 days ago
Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for further experimental investigation is a key challenge in current sequencing studies for explor...considerations” MutationTaster‐2 (MT2)“Evaluation...n P values based on an alignment and a model of neutral evolut...2244 days ago
Binding Site Prediction in Protein !
The interaction between proteins and other molecules is fundamental to all biological functions...dicting the structure of the intermolecular complex formed bet...Pocket-Finder Automatic identification of pockets and cavit...rved due to structural restraints from those due to functional...2243 days ago
