How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependenci...wrappers: moduleslibbio-samtools-perl - Perl interface to SamTools library for DNA se...3991 days ago
Five unique traits of effective computational biologist
...mmer learned it a year before because it looked interesting; and the great biological programmer also read about the BioPerl packages, genomics, DNA string, genomic theories, or some si...3991 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3991 days ago
3986 days ago
Regular Expression Cheat Sheet
The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any goo...3994 days ago
3225 days ago
Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the GridION™ system and...e. The platform technology uses nanopores to analyse single molecules including DNA/RN...3854 days ago
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Bio++ : C Language libraries for your biological need
...nce analysis Sequence and Site objects, with various Alphabet support (DNA, RNA, Proteins, Codons, any '...getting file extensions and names, testing existence, open and store in string arrays, etc.Text: convert tex...3989 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides a...3988 days ago
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Prime Minister’s 100k Genome Project
Genomics Ebgland is destined to sequence 100,000 patients over the next five year in England. A landmark pr...er in medical science advances to push the boundaries by unlocking the power of DNA da...3964 days ago
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Postdoctoral position in bioinformatics @ Sweden
Information about the department The Department of Mathematical Sciences at Chalmers...hods development for and analysis of next generation DNA sequencing, in particular com...large-scale data, in particular from next generation DNA se...3989 days ago
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Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a research field called bioinformatics....rs to analyze life. One is example is the genome. In all organisms, DNA co...3958 days ago
2185 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # h...= x['accession'] print("downloading", nm) dna = Entrez.efetch(db='nucleotid...t').read().split("\n")[1:] allseq[nm] = ''.join(dna)...1177 days ago
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