3975 days ago
3974 days ago
Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script
Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6) Problem : The CG island is a stretch of DNA (usually longer than 200 bases) in which the frequency of the CG se...3853 days ago
List of In-silico Binding Site Prediction Tools
...ous structure- and sequence-based methods have been developed for this problem. Here we introduce ConCavity,...amples the medial axis of the complement of the molecule, reducing the problem dimension to two, since the m...3772 days ago
Rosalind Problem Solution with Perl
...arning bioinformatics and programming through problem solving. Take a tour to get t...about Rosalind puzzle at http://rosalind.info/problems/list-view/?location=bioinfor...I will provide solution of all the Rosalind problem with Perl for community. Che...3280 days ago
Genome Assembly Tools and Software - PART1 !!
...embler by modeling the transcriptome assembly problem as tracking a set of trajecto...g isoforms by solving a series of bin-packing problems FermiKit 0.13 – D...mation to assist in trouble-shooting assembly problems, and it handles large datase...2714 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be executed and the order in wh...xecuted. An algorithm is merely the sequence of steps taken to solve a problem. The steps are normally "sequ...2687 days ago
Edit distance application in bioinformatics !
There are other popular measures of edit distance, which are calculated using a different set of allowable edit operations. For instance, the Damerau&ndash...2369 days ago
Python learning resources for bioinformatics and computational biologist !
...ny values) Porting to Python 3: An In-Depth Guide (2.6 - 2.x & 3.1 - 3.x) Practical Programming in Python - Jeffrey Elkner (PDF) Problem Solving with Algorithms and D...2283 days ago
Tools for Protein-Protein Docking !
...rotein–protein complexes using docking approaches is a difficult problem whose major challenges includ...tional space and then choose the most suitable method for your docking problem.2230 days ago