Results for "blat"
Top-level pages
Commercial and public next-gen-seq (NGS) software
...cs for: reads, contigs and snps. Align/Assemble to a reference BFAST - Blat-like Fast Accurate Search Too...ng and Quantifying Mammalian Transcriptomes by RNA-Seq. Supports Bowtie, BLAT and ELAND. From the Wold lab....3554 days ago
Software packages for next gen sequence analysis
...- Fledgling commercial product. Align/Assemble to a reference * BFAST - Blat-like Fast Accurate Search Too...ng and Quantifying Mammalian Transcriptomes by RNA-Seq. Supports Bowtie, BLAT and ELAND. From the Wold lab....3277 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...Description: command line program; automated pipeline; utilizes BWA, BLAT, and SAMTools; utilizes BWA m...atasets from same patient); dependent upon python, samtoools, pysam API, BLAT, SnpEff Input: BAM Referenc...2944 days ago
Genome Assembly Tools and Software - PART1 !!
...s, generating a much smaller set of nonredundant contigs. It contains scripts that map assembled contigs to known transcripts, currently supporting Blat and Exonerate contig-to-genom...2721 days ago
- ...he code to download was: blatSrc35.zip. However, you can al...sc.edu/admin/exe/linux.x86_64/blat/. Though YYMV, BLAT can be a...at directory and I copied the blatSrc35.zip file into that.Next...ase for all architectures.The BLAT code assumes that you are com...
2098 days ago
