Results for "identifies"
Top-level pages
List of In-silico Binding Site Prediction Tools
...ein surface. Using an efficient maximum clique algorithm, the program identifies proteins that share local str...://scbx.mssm.edu/sitehound/sitehound-download/download.html SiteHound identifies protein regions that are like...3791 days ago
Next generation sequencing in R or bioconductor environment
...The PICS package applies probabilistic inference to aligned-read ChIP-Seq data in order to identify regions bound by transcription factors. PICS identifies enriched regions by modeling...3671 days ago
Commercial and public next-gen-seq (NGS) software
...tematic Scoring of ChIP-Seq Experiments Relative to Controls. a two-pass approach for scoring ChIP-Seq data relative to controls. The first pass identifies putative binding sites and co...3566 days ago
Software packages for next gen sequence analysis
...tematic Scoring of ChIP-Seq Experiments Relative to Controls. a two-pass approach for scoring ChIP-Seq data relative to controls. The first pass identifies putative binding sites and co...3289 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...put: produces VCF CRISP Description: identifies SNPs and INDELs from pooled h...Output: VCF indelMINER Description: identifies indels from paired-end reads...n: (Broad Institute) Last update- July 2014; Identifies genomic regions that are sign...2955 days ago
- ...nce for calling genomic variants. RNAME: reference genome identifier (also known as the Reference Name). Within a SAM formatted file, the RNAME identifies the reference genome where th...
2916 days ago
Genome Assembly Tools and Software - PART1 !!
...currently supporting Blat and Exonerate contig-to-genome aligners. It identifies novel splicing events like ex...I and is capable of assembling larger genomes. CLEAT 2.0 – Identifies 3′ UTR Ends of Transcri...2732 days ago
Tools for bacterial whole genome annotation
...line. MAKER allows smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. It identifies repeats, aligns ESTs and prot...2378 days ago
Tools to Predict the Impact of Missense Variants !
...y to be unconditionally deleterious” SIFT“Predicts whether an amino acid substitution affects protein function” GERP++“Identifies constrained elements in multi...2250 days ago
