Comment on "Installing Perl environment on Linux"
...rl-app-cpanminusSolving environment: done ## Package Plan ## environment location...: - perl - perl-app-cpanminus The following packages will be downloaded: package...----------- Total: 11.4 MB The following NEW packages will be INSTALLED: libgcc:...2168 days ago
2179 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
R package to Finds Synteny in a Sequence Database http://origin.rdrr.io/bioc/DECIPHER/man/FindSynteny.html2739 days ago
Comment on "List of gene ontology software and tools"
Thanks for such a useful list of tools for GO study. I found FUNC: a package for detecting significant associations between gene sets and ontological annotations (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1800870/) also very useful.3016 days ago
Comment on "Computer simulation of genetic mechanism !!"
Thanks for such a useful list of tool for simulation studies. I guess you forgot to add RSVSim: an R/Bioconductor package for the simulation of structural variations ( https://www.bioconductor.org/packages/release/bioc/html/RSVSim.html ) in the list.3016 days ago
Comment on "R and Bioconductor Tutorial"
There are many othe useful turoial on R package creation, such as http://www.r-bloggers.com/creating-an-r-package-in-windows/ http://hilaryparker.com/2014/04/29/writing-an-r-package-from-scratch/ http://www.r-bloggers.com/how-to-create-an-r-package-in-windows/3214 days ago
Comment on "R and Bioconductor Tutorial"
R package development https://www.rstudio.com/products/rpackages/devtools/3214 days ago
Comment on "R and Bioconductor Tutorial"
Create the R package https://cran.r-project.org/doc/contrib/Leisch-CreatingPackages.pdf3214 days ago
Comment on "Next generation sequencing in R or bioconductor environment"
UNDO: a Bioconductor R package for unsupervised deconvolution of mixed gene expressions in tumor samples http://bioinformatics.oxfordjournals.org/content/early/2014/09/10/bioinformatics.btu607.abstract3565 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
...ical analysis, create fancy graphs(ggplot2), work with rnaseq data (Deseq,degseq,etc), pathway analysis, etc, however R itself just a statistical package not generally into programmin...3573 days ago