How to install Perl modules manually, using CPAN command, and other quick ways
...he case sensitivity, make and make test.# perl Makefile.PLChecking i...kefile for XML::Parser# make# make testInstall the perl module:Now yo...nbsp; 00:00(2/5): perl-Test-Harness-2.64-31.fc9.i386.rpm&...interface to SamTools library for DNA sequencinglibbiojava-java - Ja...3989 days ago
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological dat...the great biological programmer also read about the BioPerl packages, genomics, DNA...3990 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3989 days ago
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Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha h...and lipid-exposed faces of the TM domains. Results: In a cross validated test on single sequences, our tran...3984 days ago
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Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the GridION™ system and...e. The platform technology uses nanopores to analyse single molecules including DNA/...3852 days ago
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Bio++ : C Language libraries for your biological need
...ew feature has been added in the latest version, these are as follow...ts, with various Alphabet support (DNA, RNA, Proteins, Codons, any 'W...ion.Sequence bootstrap.Homogeneity test (Bowker's test).etc. Phyloge...getting file extensions and names, testing existence, open and store...3987 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides...3987 days ago
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Prime Minister’s 100k Genome Project
...edical science advances to push the boundaries by unlocking the power of DNA data. The UK will become the...its mainstream health system – leading the global race for better tests, better drugs and above all...3962 days ago
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Postdoctoral position in bioinformatics @ Sweden
Information about the department The Department of Mathematical Sciences at Chalmers...hods development for and analysis of next generation DNA sequencing, in particular com...large-scale data, in particular from next generation DNA...3987 days ago
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Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA sequences, has highlighted a research field called bioinformatics....rs to analyze life. One is example is the genome. In all organisms, DNA...3956 days ago
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Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # h...= x['accession'] print("downloading", nm) dna = Entrez.efetch(db='nucleotid...t').read().split("\n")[1:] allseq[nm] = ''.join(dna)...1175 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at...rdsville, School of Pharmacy. What was your greatest scientific disappointment in...the output of a tool/software but do a benchmarking test for each of the tools which t...2401 days ago
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