Read a tab delimited file and search with perl
use strict; use warnings; use Data::Dumper; use Text::CSV; use IO::Handle; my $file = "/home/urbe/Tools/Alienomics_v0.1/Alienomics/output/intermediate_files/rRNA/refGene.megablast"; open my $fh, "[0]\n"; warn Dumper $row; # To see the structure }2574 days ago
Perl script to check perl modules and download NCBI, BUSCO, Taonomy, Silva databases !
...rint "\n Module $_ OK!\n";} } # end 'for' } # end 'BEGIN' block #Bash script else here print "\nDownloading third party database for Alienomics\n"; #Install NCBI taxdump...1209 days ago
1207 days ago