Results for "Bio-Linux"

Bio-Scripts

  • Install hhsuite using conda !

    (base) [abhi@hn1 bin]$ conda install -c conda-forge -c bioconda hhsuite Collecting package metadata (current_repodata.json): done Solving environment: done ## Packa...

    994 days ago

  • Installing Covid19 Environment !

    (base) vikas@vikas-Lenovo-ideapad-320-15ISK:~/vinodLab/Genepi$ conda env create -f covid19-environment.yml Collecting package metadata (repodata.json): done Solving en...

    975 days ago

  • Remove Apache2 from Linux !

    #Purge it sudo apt-get purge apache2 #Auto remove sudo apt-get autoremove #Remove sudo rm -rf /etc/apache2 #Try this sudo apt remove apache2.*

    968 days ago

  • Update the Linux OS !

    #To update the linux OS -- run the following sudo -- sh -c 'apt-get update; apt-get upgrade -y; apt-get dist-upgrade -y; apt-get autoremove -y; apt-get autoclean -y' #OR sudo apt-get update && sudo apt-get upgrade

    912 days ago

  • Install Ruby using Conda !

    [abhi@hn1 MetaCarvel]$ conda install -c conda-forge ruby Collecting package metadata (current_repodata.json): done Solving environment: done ## Package Plan ##...

    877 days ago

  • Install mgsc on Ubuntu !

    (abhiENV) [abhi@hn1 output_OM824]$ conda create -n mgsc python=3.6 graphviz numpy Collecting package metadata (current_repodata.json): done Solving environment: failed...

    877 days ago

  • Install Install Gffcompare on Ubuntu / Linux

    #Gffcompare is a program that is used to perform operations on general feature format (GFF) and general transfer format (GTF) files. It has a binary distribution compati...

    875 days ago

  • Install R in Ubuntu / Linux !

    #R is a feature rich interpretive programming language originally released in 1995. It is heavily used in the bioinformatics community largely due to numerous R librarie...

    875 days ago

  • Install StringTie on ubuntu / Linux !

    #StringTie is a software program to perform transcript assembly and quantification of RNAseq data. The binary distributions are available so to install we can just downl...

    875 days ago

  • Install Varscan on Ubuntu / Linux !

    #Varscan is a java program designed to call variants in sequencing data. It was developed at the Genome Institute at Washington University and is hosted on github. To us...

    875 days ago