Results for "vi"

Bio-Scripts

  • blastpgp arguments !

    ...default = 40 -f Threshold for extending hits [Integer] default = 0 -e Expectation value (E) [Real] default = 10.0 -m alignment view options: 0 = pairwise, 1...

    1005 days ago

  • Command line to download blast database / protein

    ...d NCBI RefSeq #First run this to download wget 'ftp://ftp.ncbi.nlm.nih.gov/blast/db/nr.*.tar.gz' #cat them into one cat nr.*.tar.gz | tar -zxvi -f - -C .

    998 days ago

  • Install hhsuite using conda !

    (base) [abhi@hn1 bin]$ conda install -c conda-forge -c bioconda hhsuite Collecting package metadata (current_repodata.json): done Solving environment: done ## Package Plan ##...

    997 days ago

  • Downloading mmseqs databases !

    ....embl.de - dbCAN2 Profile - http://bcb.unl.edu/dbCAN2 - Resfinder Nucleotide - https://cge.cbs.dtu.dk/services/ResFinder - Kalamari...

    997 days ago

  • Installing Covid19 Environment !

    (base) vikas@vikas-Lenovo-ideapad-320-15ISK:~/vinodLab/Genepi$ conda env create -f covid19-environment.yml Collectin...ata (repodata.json): done Solving environment: done Downlo.../home/vikas/anaconda3/envs/covid19-genepi/opt/krona/taxonomy...

    978 days ago

  • Install MySQL on Ubuntu !

    ...install mysql-server #Once the installation is completed, the MySQL service will start automatically. T...D WITH mysql_native_password BY 'very_strong_password'; mysql > FLUSH PRIVILEGES; #The second, recomme...

    974 days ago

  • Install Php on Ubuntu / Apache server !

    #Installing PHP 7.2 with Apache #If you are using Apache as your web server to install PHP and Apache PHP module run the following command: sudo apt install php libapache2-mod-php #Once the packages are installed restart the Apache service: sudo systemctl restart apache2

    974 days ago

  • Update Pangolin !

    $ pangolin --update #Major update conda activate pangolin git pull conda env update -f environment.yml pip install . re-installs pangolin.

    957 days ago

  • Awk build in commands !

    ...3, and so on ($0 is the entire line) — that break a line of text into individual words or pieces called fi...#FS: FS command contains the field separator character which is used to divide fields on the input line. T...

    949 days ago

  • Update conda version !

    Lenovo-ideapad-320-15ISK:~/VANSH$ conda update -n base conda Collecting package metadata (current_repodata.json): done Solving environment: done ## Package Plan ## environmen...

    917 days ago