1005 days ago
Command line to download blast database / protein
...d NCBI RefSeq #First run this to download wget 'ftp://ftp.ncbi.nlm.nih.gov/blast/db/nr.*.tar.gz' #cat them into one cat nr.*.tar.gz | tar -zxvi -f - -C .998 days ago
997 days ago
Downloading mmseqs databases !
....embl.de - dbCAN2 Profile - http://bcb.unl.edu/dbCAN2 - Resfinder Nucleotide - https://cge.cbs.dtu.dk/services/ResFinder - Kalamari...997 days ago
Installing Covid19 Environment !
(base) vikas@vikas-Lenovo-ideapad-320-15ISK:~/vinodLab/Genepi$ conda env create -f covid19-environment.yml Collectin...ata (repodata.json): done Solving environment: done Downlo.../home/vikas/anaconda3/envs/covid19-genepi/opt/krona/taxonomy...978 days ago
974 days ago
Install Php on Ubuntu / Apache server !
#Installing PHP 7.2 with Apache #If you are using Apache as your web server to install PHP and Apache PHP module run the following command: sudo apt install php libapache2-mod-php #Once the packages are installed restart the Apache service: sudo systemctl restart apache2974 days ago
957 days ago
949 days ago
917 days ago