Results for "pe"
Bio-Scripts
Installing ggplot2 and its dependencies on Ubuntu !
...beling_0.3.tar.gz' Content type 'application/x-gzip' length 1...lot2_3.2.1.tar.gz' Content type 'application/x-gzip' length 3...RTIFY_SOURCE=2 -g -c stri_escape.cpp -o stri_escape.o g++ -st...ncoding_management.o stri_escape.o stri_exception.o stri_ICU_s...1610 days ago
- ...29/miniconda3 added / updated specs: - conda The foll...37h7b6447c_0 82 KB pyopenssl-19.1.0 |....3.1-py37_0 --> 20.0.2-py37_1 pyopenssl...####################### | 100% pyopenssl-19.1.0 | 87 KB |...
1607 days ago
To convert just one specific read group to fastq
...the process is to extract reads, tagged with readgroups to paired files. samtools fastq -t -1 all1.fq -2 all2.fq all.bam # To convert just one specific read group. samtools vi...1603 days ago
- $MT:~/Downloads/cgr-perl$ sudo apt-get install gnuplot [sudo] password...jit: Reading package lists... Done Building dependency tree Reading st...to get 15.8 MB/15.8 MB of archives. After this operation, 65.0 MB of additional...
1601 days ago
Install python-numpy python-scipy python-matplotlib on Ubuntu !
...otlib Reading package lists... Done Building dependency tree Reading st...libjs-jquery-ui-docs python-cycler-doc dvipng ffmpeg inkscape ipython python-cair...to get 21.1 MB/21.1 MB of archives. After this operation, 83.2 MB of additional...1601 days ago
- ...Pro-3335-MT:~$ java -version openjdk version "11.0.6" 2020-01-14 OpenJDK Runtime Environment (buil...post-Ubuntu-1ubuntu118.04.1) OpenJDK 64-Bit Server VM (build 1...kage lists... Done Building dependency tree Reading st...kage lists... Done Building dependency tree Reading st...
1600 days ago
Bash oneliner to extract all ids from a multifasta file
#List of ids - one per line in allIds.txt $ awk 'BEGIN{while((getline0)l[">"$1]=1}/^>/{f=!l[$1]}f' seq.fa # You can play with this f=!l[$1 ] if wanted to extract or not extract the ids1598 days ago
Install Parrot Virtual Machine !
...s program, you obviously have Perl 5--I'll be pulling some de.............................skipped. inter::yacc - Is y...o::va_ptr - Test the type of va_ptr.......................ch --hash-seed F00F specify hex value to use as hash...1597 days ago
- ...jit: Reading package lists... Done Building dependency tree Reading st...d. Need to get 452 kB of archives. After this operation, 1,459 kB of additional...u0.1) ... #MORE at https://vcftools.github.io/perl_module.html # Calculate...
1586 days ago
- ...in. [sudo] password for jit: Reading package lists... Done Building dependency tree Reading st...remove and 0 not upgraded. Need to get 80.0 kB of archives. After this operation, 221 kB of additional d...
1586 days ago
