Results for "program"
Bio-Scripts
Command line to create blast uniref database !
#The NCBI BLAST+ distribution does not include 'blastpgp', it has been replaced by the 'psiblast' program. The 'blastpgp' program is available in the legacy NCBI BLAST package (no longer supporte...992 days ago
Get the Linux system information !
...menu-dialog: a menu driven system information program DIALOG_CANCEL=1 DIALOG_ES...$DIALOG_CANCEL) clear echo "Program terminated." exit...; $DIALOG_ESC) clear echo "Program aborted." >&2 exit 1...990 days ago
- ...ation #To log in to the MySQL server as the root user type: sudo mysql #If you want to login to your MySQL server as root from an external program such as phpMyAdmin you have t...
961 days ago
Install Install Gffcompare on Ubuntu / Linux
#Gffcompare is a program that is used to perform operations on general feature format (GFF) and general transfer format (GTF) files. It has a binary distribution compatible with...865 days ago
Install StringTie on ubuntu / Linux !
#StringTie is a software program to perform transcript assembly and quantification of RNAseq data. The b...can just download this distribution and extract it. Like with our other programs we also make a symlink to ma...865 days ago
Install Varscan on Ubuntu / Linux !
#Varscan is a java program designed to call variants in sequencing data. It was developed at the Gen...the distributed jar file into our ~/workspace/bin. As with the other java programs which have already been inst...865 days ago
- ...le directly from our bin folder. To run GATK we must first start up the virtual environment with the command source activate, we can then run the program by providing the path to the...
854 days ago
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