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Bio-Scripts

• • LEGE@lege

  

  Install CANU with conda !

  ...el/cf201901 canu Collecting package metadata (current_repodata.json): done Solv...Proceed ([y]/n)? y Downloading and Extracting Packages canu-1.4...n: done Verifying transaction: done Executing transaction: done

  1118 days ago

• • LEGE@lege

  

  Install Shasta using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda shasta Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1118 days ago

• • LEGE@lege

  

  Install CVSTK using codna !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda csvtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1118 days ago

• • LEGE@lege

  

  Install seqkit using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda seqkit Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1118 days ago

• • LEGE@lege

  

  Install Minimap2 using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda minimap2 Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1118 days ago

• • LEGE@lege

  

  Install seqtk using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda/label/cf201901 seqtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1118 days ago

• • LEGE@lege

  

  install gap2seq using conda !

  ...cf201901 gap2seq Collecting package metadata (current_repodata.json): done Solv...da/label/cf201901::gap2seq-2.0-boost1.61_1 Proceed ([y]/n)? y Download...############################ | 100% Preparing transaction: done Verifying tra...

  1118 days ago

• • LEGE@lege

  

  Install assembly-stat using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda assembly-stats Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1118 days ago

• • LEGE@lege

  

  Install ragout using conda !

  ...loads/setu/setu$ conda install -c bioconda ragout Collecting package metadata (current_repodata.json): done Sol...ment: failed with initial frozen solve. Retrying with flexible solve. Sol...done Solving environment: done ==> WARNING: A newer version of conda...

  1118 days ago

• • LEGE@lege

  

  Install Spades using conda !

  vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda spades Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

  1118 days ago

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