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Install Minimap2 using conda !

  • Public
By LEGE 1290 days ago
vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda minimap2 Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists. <== current version: 4.9.2 latest version: 4.10.1 Please update conda by running $ conda update -n base -c defaults conda ## Package Plan ## environment location: /home/vik/anaconda3/envs/vikENV added / updated specs: - minimap2 The following packages will be downloaded: package | build ---------------------------|----------------- k8-0.2.5 | h9a82719_1 1.7 MB bioconda minimap2-2.20 | h5bf99c6_0 477 KB bioconda ------------------------------------------------------------ Total: 2.1 MB The following NEW packages will be INSTALLED: k8 bioconda/linux-64::k8-0.2.5-h9a82719_1 minimap2 bioconda/linux-64::minimap2-2.20-h5bf99c6_0 Proceed ([y]/n)? y Downloading and Extracting Packages k8-0.2.5 | 1.7 MB | ################################################################################################################################################################## | 100% minimap2-2.20 | 477 KB | ################################################################################################################################################################## | 100% Preparing transaction: done Verifying transaction: done Executing transaction: done