Results for "6"
Bio-Scripts
...smaltmap " reapr smaltmap -u 5 -n 25 WadinetaGapFilled.gapfilled.iteration1.fa /home/urbe/DATA/OriginalReads/ANature/GC027568.151120_Adineta_Nature_and_Habrotrocha.160226.HiSeq2000.FCB.lane1.gcap_...2148 days ago
- .... remote: Counting objects: 369, done. remote: Total 369 (delta 0), reused 0 (delta 0...- found -- Check size of off64_t -- Check size of off64_t...x/BamStandardIndex_p.cpp:958:26: warning: comparison between...ir/print/NGMPrinter.cpp.o [ 76%] Building CXX object src/CMa...
2147 days ago
Installing Busco version 4.0.6
...bioconda ld_impl_linux-64-2.34 | h53a641e_0...-crayon-1.3.4 | r36h6115d3f_1003 747 KB...s_impl_lin~ conda-forge/linux-64::binutils_impl_linux-64-2.34...pkgs/main::libpng-1.6.36-hbc83047_0 --> conda-forge...1501 days ago
- ...ub-production-release-asset-2e65be.s3.amazonaws.com/27452807/b52ea0c4-1e27-11e8-8de3-124a69f123c8?X-Amz-Algorithm=AWS4-H...ub-production-release-asset-2e65be.s3.amazonaws.com/27452807/...2.1-local.jar --help OpenJDK 64-Bit Server VM warning: Insuf...
2124 days ago
- ...r -> FETCH_HEAD 9544316e..dc8811f8 master -> origin/master Updating 9544316e..dc8811f8 Fast-forward li...| 6 +- plugins/shrink-path/shri...v.plugin.zsh create mode 100644 plugins/swiftpm/_swift mo...
2123 days ago
Perl script to extract a sequence from multifasta with range !
# filterfastarange.pl #!/usr/bin/perl use strict; use warnings; #perl filterfastarange.pl 301 600 contigs.fasta > contigs-gt300-lte600.fasta my $minlen = shift or die "Error: `minlen` parame...2114 days ago
Generate simulated polyploid genome !
#Generate 3% divergence msbar -point 4 -count 16558 toy.fasta > toyheterozygous3percent.fasta #Cat both files cat toy.fasta toymutated3percent.fasta > toyheterozygous3percen...2102 days ago
Installing pb-assembly on Linux !
...libreadline/6.3-foss-2016a Armadillo/2.4.4-goolf-1.4.1...rses/6.0 expat/2.1.0-foss-2016a...-2017b gnuplot/5.0.3-foss-2016a...python-msgpack: 0.5.6-py27h470a237_0 bioconda...2083 days ago
- ...mples/.git/ remote: Enumerating objects: 6, done. remote: Counting objects: 100% (6/6), done. remote: Compressin...asta greg200k-sv2.2/orig.links/000000F_2769948-2970164.fasta greg200k-s...a greg200k-sv2.2/subreads1.fasta 30 18.6M 30 5840k 0 0 1005k...
2083 days ago
Perl script to create a consensus of nucleotide sequences !
...|0) || $prefOrder{$b} $prefOrder{$a} } qw/A T G C/ ]->[0]; } return @cons; } #reference https://www.perlmonks.org/bare/?node_id=5009622080 days ago
