Results for "IG"
Bio-Scripts
Perl script to reverse complement a DNA sequence !
...was a bad algorithm, and the reverse complement was wrong!\n"; print "Try again ... \n\n"; # Make a new copy of the DNA (see why we saved the original?) $revcom = reverse $DNA...2071 days ago
Installing pb-assembly on Linux !
...ncurses/5.9-GCC-4.7.2 Eigen/3.2.9-foss-2016b...OpenFOAM/DP/1.6-ext fontconfig/2.11.94-foss-2016a...SWIG/3.0.12-foss-2017b-Python-2.7....###| Time: 0:00:00 21.17 MB/s pbalign-0.3.1- 100% |###############...2062 days ago
- ...links', '/home/users/j/n/jnarayan/FALCON-examples/.git-sym') git: 'check-ignore' is not a git command. Se...0 --:--:-- --:--:-- --:--:-- 0greg200k-sv2.2/ greg200k-sv2.2/orig.links/ greg200k-sv2.2/orig.l...
2062 days ago
- ...~~~~~ init.c:847:5: warning: ignoring return value of ‘fgets’...~~~~ init.c:1231:5: warning: ignoring return value of ‘fgets’...mandLineNPK.c:664:7: warning: ignoring return value of ‘scanf’...^~~~~~~~~~~~~~~~~~~~~~~ design_utils.c: In function ‘loadSt...
2054 days ago
- ...25T113641Z&X-Amz-Expires=300&X-Amz-Signature=2ec8006aeb069dae00035e2...de816d82672db24e2945fa8aaaf1&X-Amz-SignedHeaders=host&actor_id=0&res...htslib-1.9/bgzip.c htslib-1.9/config.mk.in htslib-1.9/configure.a...slib-1.9/version.sh htslib-1.9/config.h.in htslib-1.9/configure ➜...
2047 days ago
Installing Platypus on Ubuntu !
...dev (3.6.5-3ubuntu1) ... Processing triggers for mime-support (3.60ubuntu1) ... Processing triggers for desktop-file-utils (0...l/share/man/man5 /usr/local/lib/pkgconfig mkdir: cannot create directo....7/cerrormodel.so cythoning cython/calign.pyx to cython/calign.c /hom...2047 days ago
- ...On_Cyan='\033[46m' # Cyan On_White='\033[47m' # White # High Intensity IBlack='\033[0;90m' # Black IRed='\033[0;91m' # Red IGreen='\033[0;92m' # Gree...
2046 days ago
CollectGcBiasMetrics.jar will generate a GC bias plot for each contig
samtools index aln-pe.mapped.sorted.bam for i in $(samtools view -H aln-pe.mapped.sorted.bam | awk -F"\t" '/@SQ/{gsub("^SN:","",$2);print $2}' ); do samtools view...2031 days ago
Setting up falconUnzip conda environments for genome assembly !
...py_1 9 KB conda-forge pbalign-0.3.1 |...0.2.4-py27ha92aebf_0 bioconda pbalign: 0.3.1-py27_...################################### | 100% pbalign-0.3.1 | 76 KB | #...2018 days ago
- ...kes your local repo exactly like your remote repo. Remember to replace origin and master with the remote and branch that you want to synchronize with. git fetch origin git reset --hard origin/ma...
2009 days ago
