952 days ago
Run Pango on your multifasta file !
...ml (base) [jnarayan@hn1 FASTA]$ conda activate pangolin (pangolin)...Trained model: /home/jnarayan/anaconda3/envs/pangolin/lib/python3.8/...ib Header file: /home/jnarayan/anaconda3/envs/pangolin/lib/python3.8/.../2021, 13:10:08 /home/jnarayan/anaconda3/envs/pangolin/lib/python3.8/...937 days ago
912 days ago
Installing SEVA environment in Conda !
(base) [jnarayan@hn1 SEVA_codes_and_files]$ conda env create -f SEVA.yaml Collec...To activate this environment, use # # $ conda activate SEVA # # To deactivate an active environment, use # # $ conda deactivate...888 days ago
875 days ago
875 days ago
bash script to extract sequence by ids !
...3.1 CTGACGTATACAATTAAGCCGCG >BGI_novel_T018109 Solyc03g080075.1.1 GCAAGGGAAAGAAGTATTACTAG Note that seqtk can be installed, for example, using conda.873 days ago
861 days ago
835 days ago
42 days ago