Results for "No"
Bio-Scripts
Install BLAST in Ubuntu/Linux and Window !
...: Download ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.7.1/ncbi-blast-2.7.1+-win64.exe with your web browser. #If that FTP links does not work, try HTTP instead http:...1191 days ago
- ...is $rcDNA\n"; #look for a start codon in the reverse sequence if($rcDNA =~ /ATG/){ print "Start codon found\n"; } else{ print "Start codon not found\n"; }
2961 days ago
Parse a genbank file using regular expressions
...ile.txt"; open (GENBANK, $genbank) || die "cannot open $gb_report for reading:...ranslation still going on if (!/"/) { # no terminal quote; translation c...print "Problems: end of translation product not found.\n"; } }...2961 days ago
- ...ence directory and open it (i.e, read contents) chdir($myDir) || die "Cannot change to $myDir: $!"; # Go to $myDir opendir(DIR, ".") || die "Cannot open .: $!"; # Open $my...
2960 days ago
Perl script to Mutate a DNA Sequence
...sks for the file name of the DNA sequence. # If the DNA sequence file is not in the same directory of thi...$dnafilename; unless ( open(DNAFILE, $dnafilename) ) { print "Cannot open file \"$dnafilename\"\n...2960 days ago
Perl script to count the number of Adenine, Thymine, Guanine and Cytosine in your DNA Sequence
...ame of the DNA sequence. If the sequence file is not available in the same direct...dna_filename) ) { print "Sorry the file does not exist!!! \n"; print "Canno...; } else { print "Error - Unknown base: $base\n"; ++...2960 days ago
Retrieve NCBI GenBank records with a range of accession numbers
...} message( $param{verbose}, "ESearch results could not be parsed. Resubmitting quer...open( my $OUTFILE, ">" . $param{outputFile} ) or die("Error: Cannot open $param{outputFile} : $!...2960 days ago
A multilayer perceptron (MLP) neural network in Perl
...mPatterns = 4; ######################################## my $patNum; my $errThisPat; my $outPred; my $RMSerror; my @trainInputs; my @trainOutput; # the outputs of t...2960 days ago
Extract a random sequence from a file
...utputfile; my $size = 21; my $count = 10; while (my $line = ) { next unless $line =~ /^([ATGCN]+)/; my $genome = $1; my $len_genome = length $genome; my...2959 days ago
- ...+ ($size/2); # Figure out URL for the DAS server. Example: # http://genome.ucsc.edu/cgi-bin/das/calJac3/dna?segment=chr14:482280,483280 my $URL_gene ="http://genome.ucsc.edu/cgi-bin/das/papAnu...
2954 days ago
