Comment on "Phylogenetic for Bioinformatics"
Nice evolutionary distance caculation methods @ https://www.cs.rice.edu/~nakhleh/COMP571/Slides/Phylogenetics-DistanceMethods-Full.pdf614 days ago
Comment on "URMAP, an ultra-fast read mapper"
...or 10, whichever is smaller. The -veryfast option specifies a variant mapping algorithm which is ~3x faster but somewhat less accurate. To get the full speed improvement, the index...1307 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
International Journal of Bioinformatics Research and Applications Indexed in Scopus (Elsevier) Academic OneFile (Gale) ACM Digital Library Current Awareness in Biological Sciences (Elsevier) Chemical Abstracts (CAS)1387 days ago
1544 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
Benchmark (or "High-confidence") variant calls and regions:We developed an integration pipeline to utilize sequencing data generated by multiple technologies to genera...1583 days ago
1959 days ago
Comment on "List of motif discovery tools !"
Motif algorithms This link on Nature explain: how does DNA sequence motif discovery work? Paper on BMC bioinformatics: survey of DNA motif finding algorithms This paper discusses some limitations and potentials of motif discovery algorithms (2005)2005 days ago
2123 days ago
Comment on "Run miniasm assembler on nanopore reads !"
Must read paper https://genome.cshlp.org/content/27/5/737.full2191 days ago
2199 days ago