Comment on "How to install Perl modules on Mac OS X in easy steps !!"
Our Perl script for drawing requires the GD module(2.41 or later version). Moreover, the GD module requires the following packages. The gd graphics library The PNG graphics libraryThe zlib compression library2247 days ago
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Comment on "Perl one-liner for bioinformatician !!!"
Convert file to lowercase dd $ dd if=input.txt of=output.txt conv=lcase tr $ tr '[:upper:]' '[:lower:]' < input.txt > output.txt awk $ awk '{ print tolow...2272 days ago
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
Install cpanm to make installing other modules easier (you'll thank us later). You need to type these commands into a Terminal emulator (Mac OS X, Win32, Linux) cpan App::cpanminus Now install any module you can find. cpanm Module::Name2277 days ago
Comment on "Perl Module Installation"
tar zxf Digest-SHA1-2.13.tar.gz cd Digest-SHA1-2.13 perl Makefile.PL make make test make install2296 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Useful bioinformatics blog pages 123Bioinformaticshttp://www.123bioinformatics.com Binfalse - Bioinformatics and System Administrationhttp://binfalse.de/ Bioinformatics Zenhttp...2301 days ago
Comment on "Basic command-line to run BLAST"
...omo_sapiens/protein ... done.==> SIZE protein.fa.gz ... 12021576==> PASV ... done. ==> RETR prote...us_musculus/protein ... done.==> SIZE protein.fa.gz ... 10463933==> PASV ... done. ==> RETR prote...2303 days ago
Comment on "Bioinformatics tools developed for Oxford Nanopore data analysis !"
NanoComp: comparing multiple runs NanoStat: statistic summary report of reads or alignments NanoFilt: filtering and trimming of reads NanoLyse: removing contaminant reads (e.g. lambda control DNA) from fastq2312 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...occurrences: 7.475; average spacing: 2.940[M::worker_pipeline...occurrences: 7.298; average spacing: 2.937[M::worker_pipeline...occurrences: 3.628; average spacing: 2.938[M::worker_pipeline...sm/miniasm -f both.fastq AONT.paf[M::main] Real time: 168.768...2340 days ago