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Results for "
Remove
"
Wire posts
Manisha Mishra
@manisha
Remove
the sequence by fasta ids. awk 'BEGIN{while((getline<"ids.txt")>0)l[">"$1]=1}/^>/{f=!l[$1]}f' seq.fa #
Remove
#Delete #ids #fasta
2225 days ago
Jit
@jit.aber
perl -pe 's/[^AGTC\n]/N/gi unless m/>/;' /media/urbe/TOSHIBALAB/falconUnzip/SSPACED_P2/scaffolds.fasta > /media/urbe/TOSHIBALAB/falconUnzip/SSPACED_P2/scaffolds_corrected.fasta #
Remove
#Non-ATCG
2158 days ago
Jit
@jit.aber
#
Remove
#smartbell from #pacbio #
remove
smartbell.sh https://github.com/BioInfoTools/BBMap/blob/master/sh/
remove
smartbell.sh
2118 days ago
BioStar
@biostar
Remove
empty line from fasta. $ sed -i '/^$/d' standard_output.final.scaffolds_online.fasta #Empty #Fasta #
Remove
2067 days ago
Rahul Nayak
@rahul
One liner to
remove
the description information from a fasta file and just keep the identifier $ perl -p -i -e 's/>(.+?) .+/>$1/g' sample1.fa #clean #header #fasta
1925 days ago
Rahul Nayak
@rahul
Basics commands for Docker https://www.digitalocean.com/community/tutorials/how-to-
remove
-docker-images-containers-and-volumes #Docker #commands
1509 days ago
Jit
@jit.aber
Remove
conda environment completely $ conda env
remove
-n env_name #
Remove
#Conda #Environment
1456 days ago
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