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• • Rahul Agarwal@raag

  

  http://www.biorxiv.org/content/early/2016/10/05/079301 #omics #genetics#sequencing #animal

  2831 days ago

• • Jit@jit.aber

  

  du -sh * will give you the size of all the directories,files etc in current directory in human readable format. #Linux #Size #Tricks #Folders #Files

  2875 days ago

• • Jit@jit.aber

  

  Split the text file with line number in Linux: wc -l abc.txt and then: split -l 60000 abc.txt #Split #Break #Line #Ubuntu #Linux #Tricks

  2843 days ago

• • Neel@neelam

  

  Contact many files: $ for a in *.txt ; do cat $a >> newFile ; done #Linux #Tricks

  2861 days ago

• • Shruti Paniwala@shruti

  

  Rename the fasta name perl -ane 'if(/\>/){$a++; @foo = split /\s+/;$_ = join '_', @foo; print "$_\n"}else{print;}' your.fasta > new.fa #PerlTrick #PerlOneliner #Perl

  2851 days ago

• • Jit@jit.aber

  

  Understanding N50 http://jermdemo.blogspot.be/2008/11/calculating-n50-from-velvet-output.html #N50 #Assembly #Genome #Contigs

  2858 days ago

• • Jit@jit.aber

  

  A perl script for mapping fasta formated sequences to multiple reference sequences using one of several alignment programs. http://seq.crg.es/download/software/Miro/doc/run_Mapping.html #Perl #Script

  2832 days ago

• • Rahul Agarwal@raag

  

  Identify and Remove Outlier Samples!! https://labs.genetics.ucla.edu/horvath/CoexpressionNetwork/HumanBrainTranscriptome/Identification%20and%20Removal%20of%20Outlier%20Samples%20-%20Illumina.pdf #Re

  2829 days ago

• • Jit@jit.aber

  

  exfat on ubuntu $ sudo apt-get install exfat-utils exfat-fuse #exfat #ubuntu #mount

  2825 days ago

• • Shruti Paniwala@shruti

  

  Re-install perl in Ubuntu: sudo aptitude reinstall perl #Perl #Ubuntu #Install #Linux

  2810 days ago

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