Results for "Ra"

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  • Extract fasta with Ids. $ perl -ne 'if(/^>(\S+)/){$c=grep{/^$1$/}qw(id1 id2)}print if $c' fasta.file #extract #fasta #sequence #ids

    2270 days ago

  • Bioinformatics tutorial https://jasonjwilliamsny.github.io/wrangling-genomics/01-automating_a_workflow.html #Workflow #Tutorial #BAM #SAM #SNP

    2268 days ago

  • http://animaldiversity.org/accounts/Rotifera/ #Rotifer #Introduction #Animal

    2255 days ago

  • https://scrapy.org/ #extract #data #from #websites #webscraping

    2245 days ago

  • reformat.sh in=reads.fq out=highQuality.fq maq=16 (that will throw away all reads with average quality below 16) #Filter #BBMap #Quality

    2218 days ago

  • Finding coding regions in DNA sequences http://genome.crg.es/courses/Lisbon04/exercises/day2/Perl_programming/index.html #Perl #Genes #Script

    2215 days ago

  • To upgrade the perl in Linux $ sudo cpan; cpan[1]> upgrade #Perl #Upgrade #Linux #Ubuntu

    2212 days ago

  • #Scientific #converter https://www.rapidtables.com/convert/number/scientific-notation-converter.html

    2205 days ago

  • #Zero coverage regions ~/Tools/bedtools2/bin/bedtools genomecov -ibam PvsH_aln_sorted.bam -bga | awk '$4==0' > ZERO_coverage_regions.txt

    2204 days ago

  • Transcriptome assembly https://www.rna-seqblog.com/tag/transcriptome-assembly/ #RNA-seq #Transcriptome #Assembly

    2194 days ago