BOL: Results for "File"

Results for "File"

- Jit@jit.aber
Split the file in Linux with size. $ split --bytes=50M aaaa.fa #split #linux #size
2548 days ago
- Rahul Nayak@rahul
Remove unwanted character from fasta file. sed -e '/^[^>]/s/[^ATGCatgc]/N/g' file.fa #fasta #file #header #charater
2534 days ago
- Rahul Nayak@rahul
Remove "|" from fasta header. $ sed 's,|,_,g' -i file.fa #fasta #header #sed
2534 days ago
- Jit@jit.aber
Remove unwanted character from fasta file. $ sed -e '/^[^>]/s/[^ATGCatgc]/N/g' file.fa #IUPAC #Special #Character #Remove
2522 days ago
- Jit@jit.aber
Remove duplicated lines from text file. $ awk '!seen[$0]++' allIds #duplicate #lines #remove #awk
2512 days ago
- Jit@jit.aber
Get the reads in fastq file: awk '{s++}END{print s/4}' file.fastq #reads #count #ngs #fastq
2422 days ago
- Jit@jit.aber
Sort a file with column 2: sort -g -k 2,2 allPacbio.fa.fai > sorted.fai #sort #file #column
2421 days ago
- Jit@jit.aber
Linux command to find the file contains a string "LOCK_EX": grep -Ril "LOCK_EX" / #Root #Find #Linux #Grep #search
2401 days ago
- Neel@neelam
Bioinformatics JRF at IIT https://www.iitr.ac.in/administration/uploads/File/bt/2017/adv30112017.pdf #JRF
2398 days ago
- Surabhi Chaudhary@surabhi
Remove the unwanted characters from Fasta file: sed -e '/^[^>]/s/[^ATGCatgc]/N/g' infile.fa #sed #unwanted #illegal #remove #correct #fasta #linux
2396 days ago