Tags: Comparative, Genomics, Exercise2, Genome, NGS
2143 days ago
Phased Human Genome Assembly !
The new publicly available assembly (PacBio HG00733) has the fewest gaps of any human genome assembly, with more than half of the genome contained in gapless sequence at least 27 Mb long. The primary contig assembly is 2.89 Gb long and consists of 865 contigs that were assembled with PacBio ...Tags: Phased, Human, Genome, Assembly, NGS, PacBio
2096 days ago
You can't hide from Genome Hackers
Young computational biologist named Yaniv Erlich shocked the research world by showing it was possible to unmask the identities of people listed in anonymous genetic databases using only an Internet connection Paper: http://science.sciencemag.org/content/early/2018/10/10/science.a...Tags: Genome, Hackers, NGS
2091 days ago
BAUM – Improving Genome Assembly by Adaptive Unique Mapping and Local Overlap-Layout-Consensus
BAUM, breaks the whole genome into regions by adaptive unique mapping; then the local OLC is used to assemble each region in parallel. BAUM can: (1) perform reference-assisted assembly based on the genome of a close species; (2) or improve the results of existing assemblies that are obtained base...Tags: BAUM, Improving, Genome, Assembly, Adaptive, Unique, Mapping, Local, Overlap-Layout-Consensus, OLC
2080 days ago
VGSC: A Web-Based Vector Graph Toolkit of Genome Synteny and Collinearity
VGSC, the Vector Graph toolkit of genome Synteny and Collinearity, and its online service, to visualize the synteny and collinearity in the common graphical format, including both raster (JPEG, Bitmap, and PNG) and vector graphic (SVG, EPS, and PDF).Tags: VGSC, Web-Based, Vector, Graph, Toolkit, Genome, Synteny, Collinearity
2074 days ago