Comment on "BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries"
One more intersting approach by Sonal Singhal @ https://github.com/CGRL-QB3-UCBerkeley/denovoTargetCapturePopGen/blob/master/2-ScrubReads2369 days ago
Comment on "Virtual Bioinformatics Online Tutorial"
Bioinformatics online training resources Cancer Research UK Cambridge Bioinformatics core facility HarvardX Biomedical Data Science Open Online Training SIB Vi...2376 days ago
Comment on "Does anyone have Nanopore latest updates?"
92% genome coverage of E. coli, average depth of 3.8x. But from just _43_ reads https://github.com/nickloman/massive-nanopore-silliness http://lab.loman.net/2017/03/09/ultrareads-for-nanopore/2607 days ago
Comment on "Perl and BioPerl Tutorials"
Perl books http://perltraining.com.au/notes.html https://github.com/vhf/free-programming-books/blob/master/free-programming-books.md#perl2671 days ago
Comment on "Structural variation: the hidden genomic treasure"
Structural variant detection and association testing https://github.com/zeeev/wham2682 days ago
Comment on "Structural variation: the hidden genomic treasure"
...p;(e.g., segmental duplications, recent retrotransposons). https://code.google.com/archive/p/hydra-sv/wikis/TypicalWorkflow.wiki GitHub https://github.com/arq5x/Hydra2758 days ago
Comment on "Structural variation: the hidden genomic treasure"
...aller. GRIDSS calls variants based on alignment-guided positional de Bruijn graph break-end assembly, split read, and read pair evidence. https://github.com/PapenfussLab/gridss2758 days ago
Comment on "RACA: Reference-Assisted Chromosome Assembly"
...panying the genome assembly process. More at http://gigascience.biomedcentral.com/articles/10.1186/s13742-016-0141-6 Script at https://github.com/gtamazian/chromosomer2826 days ago
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