Comment on "Worldwide funding agencies to fund your bioinformatics research !!"
...At least a doctorate An idea for an excellent research project in the applied sciences A craving for new challenges Find the funding scheme right for you: INTERNATIONAL RES...3055 days ago
3078 days ago
Comment on "Worldwide funding agencies to fund your bioinformatics research !!"
...lly free of bureaucracy. Scientists and scholars of all disciplines from abroad who have completed their doctorates within the last six years are eligible to apply. The award targe...3082 days ago
Comment on "List of gene ontology software and tools"
Thanks for such a useful list of tools for GO study. I found FUNC: a package for detecting significant associations between gene sets and ontological annotations (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1800870/) also very useful.3120 days ago
Comment on "List of popular bioinformatics software/tools"
MEDIPS: genome-wide dierential coverage analysis of sequencing MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments https://www.bioconductor.org/packages/3.3/bioc/vignettes/MEDIPS/inst/doc/MEDIPS.pdf3144 days ago
Comment on "List of popular bioinformatics software/tools"
Mapping single molecule sequencing reads using Basic Local Alignment with Successive Refinement (BLASR) http://bix.ucsd.edu/projects/blasr/3156 days ago
Comment on "Alignment of closely related whole genomes/scaffolds"
Hmmm great link Rahul, You can also try Mugsy: fast multiple alignment of closely related whole genomes ht...also used BWA-SW, BLAT and LASTZ. However, LASTZ is not well-suited for aligning to many chromosomes at on...3165 days ago
Comment on "List of popular bioinformatics software/tools"
PLAST is a fast, accurate and NGS scalable bank-to-bank sequence similarity search tool providing significant accelerations of seeds-based heuristic comparison methods, such as the...3183 days ago
Comment on "Bioinformatics Algorithms"
Sequence alignment algorithms http://www.math.utep.edu/Faculty/mleung/bioinformatics/chap0602.pdf3318 days ago
Comment on "Software packages for next gen sequence analysis"
DNAMAN uses fast alignment algorithms to assemble quickly and accurately a large number of overlapping sequences. This could be a nice tutorial for genome assemblies with overlapping sequences http://www.lynnon.com/pc/assembly.html3386 days ago