Comment on "BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries"
One more intersting approach by Sonal Singhal @ https://github.com/CGRL-QB3-UCBerkeley/denovoTargetCapturePopGen/blob/master/2-ScrubReads2342 days ago
Comment on "Virtual Bioinformatics Online Tutorial"
Bioinformatics online training resources Cancer Research UK Cambridge Bioinformatics core facility HarvardX Biomedical Data Science Open Online Training SIB Vi...2348 days ago
Comment on "Does anyone have Nanopore latest updates?"
92% genome coverage of E. coli, average depth of 3.8x. But from just _43_ reads https://github.com/nickloman/massive-nanopore-silliness http://lab.loman.net/2017/03/09/ultrareads-for-nanopore/2580 days ago
Comment on "Perl and BioPerl Tutorials"
Perl books http://perltraining.com.au/notes.html https://github.com/vhf/free-programming-books/blob/master/free-programming-books.md#perl2643 days ago
Comment on "Structural variation: the hidden genomic treasure"
Structural variant detection and association testing https://github.com/zeeev/wham2655 days ago
Comment on "Structural variation: the hidden genomic treasure"
...p;(e.g., segmental duplications, recent retrotransposons). https://code.google.com/archive/p/hydra-sv/wikis/TypicalWorkflow.wiki GitHub https://github.com/arq5x/Hydra2730 days ago
Comment on "Structural variation: the hidden genomic treasure"
...aller. GRIDSS calls variants based on alignment-guided positional de Bruijn graph break-end assembly, split read, and read pair evidence. https://github.com/PapenfussLab/gridss2730 days ago
Comment on "RACA: Reference-Assisted Chromosome Assembly"
...panying the genome assembly process. More at http://gigascience.biomedcentral.com/articles/10.1186/s13742-016-0141-6 Script at https://github.com/gtamazian/chromosomer2799 days ago
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