Comment on "Run miniasm assembler on nanopore reads !"
...faults (the ava-pb in the code below) for analyzing PacBio data. Minimap only accepts two FASTQ files and you need to map your FASTQ file against itself. So, if you have m...2313 days ago
Comment on "Run miniasm assembler on nanopore reads !"
...ion or consensus step, and therefore the resulting assemblies are contiguous (i.e. long) but very noisy (i.e. full of errors) We start with an all against all comparison: mini...2321 days ago
2327 days ago
Comment on "Basic command-line to run BLAST"
...OL users urbe@urbo214b[Human_vs_Avaga_protein] wget ftp://ftp.ncbi....2021576] urbe@urbo214b[Human_vs_Avaga_protein] gunzip protein.fa.gz...scope.cns.fr/adineta/data/Adineta_vaga.v2.pep.fa.gz--2018-03-14 10:2...0463933] urbe@urbo214b[Human_vs_Avaga_protein] [] urbe@urbo214b[Hu...2390 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...), Mile Sikic (2), Niranjan Nagarajan (3) (1) Ruder Boskovic I...es of the size specified in megabytes. Value <= 0 loads the...- Gotoh alignment with affine gaps. Semiglobal. anchor - ancho...le-index - If false, only one gapped spaced index will be used...2438 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...into Genetics and Genomics YOKOFAKUN Getting Genetics Done Gigabase or gigabyte Genome Spot CoreG...d Pieces Bits of DNA Bioinformatics Zen MassGenomics Kevin’s GATTACA World Genomes Unzipped...2466 days ago
Comment on "Virtual Bioinformatics Online Tutorial"
...Sequence Analysis Workshop (2013) R and NGS tutorial Bioinformatics Resources by Obi Griffith Tutorials developed and maintained by the worldwide Galaxy community2466 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...medicineGenes and developmentPNASBloodCellJAMA: The Journal of the American Medical Association Plos OnePlos MedicineJournal of Clinical Investigation (JCI) Journal of Bio...2473 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
You can find bioinformatics jobs in RG https://www.researchgate.net/jobs2481 days ago
Comment on "Ten International Scholarships for Indian Biotechnology and Bioinformatics Students"
RCB Young Investigator Awards http://www.rcb.res.in/index.php2607 days ago