Results for "2D"
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Comment on "Install composer for ELGG"
...ps://getcomposer.org/installer', 'composer-setup.php');" php -r "if (hash_file('sha384', 'composer-setup.php') === '906a84df04cea2aa72f40b5f787e49f22d4c2f19492ac310e8cba5b96ac8b641...917 days ago
Comment on "Nanopolis: polish a genome assembly"
# Index the draft genome bwa index draft.fa # Align the basecalled reads to the draft sequence bwa mem -x ont2d -t 8 draft.fa reads.fa | samtools sort -o reads.sorted.bam -T re...2114 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...tiple parameters unless overriden. [null] (Illumina Moleculo) pacbio (PacBio SMRT): -i25 -l50 -m1 -M1 -O1,1,2,2 -E1,1,1,1 -w200 -b0 -e0.30 -d0.30 ont2d (Oxford Nanopore): -i25 -l50...2138 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
...vf - Now, we are ready to go. First off, let’s extract the 2D sequence data as FASTQ from t...e script in “old_format”: ./poRe_scripts/old_format/extract2D MAP006-1/MAP006-1_downloads/p...2189 days ago
Comment on "SPAdes hybrid genome assembly"
...es.py --only-assembler -t 4 -k 21,51,71 -1 SRR2627175_1.fastq.gz -2 SRR2627175_2.fastq.gz --nanopore minion.pass.2D.fastq -o SPAdes_hybr...2189 days ago
- ...meta \ -d meta \ genomeSize=40m \ useGrid=false \ -nanopore-raw /vol_b/public_data/minion_brown_metagenome/brown_metagenome.2D.10.fasta This puts out...
2190 days ago
Comment on "Does anyone have Nanopore latest updates?"
Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes http://f1000research.com/articles/4-17/v13404 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
Website for bioinformatics job search in Denmark. http://www.stepstone.dk/5/jobsogning.html?offset=0&reloadedSearch=1&suid=94f1895e-ffbd-4063-852d-3adb95fe93463568 days ago
Comment on "Python Education Material"
...tp://www.freenetpages.co.uk/hp/alan.gauld/ Python Programming for the absolute beginner http://premierpressbooks.com/ptr_detail.cfm?isbn=1%2D59863%2D112%2D8 Python Programming: A...3960 days ago
