Results for "AI"
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...-generation sequence analysis. The primer is also designed to be self-contained and hands-on, meaning that...ther tools, and sample data sets are provided. Terms in bold are also explained in the glossary at the end...2887 days ago
- ...atics community, to get benefited by performing down-stream analysis tasks while eliminating the need to write programming code. CSBB is currently available on Linux, UNIX, MAC OS a...
2881 days ago
- ...etworks, 2) annotating networks with user-provided private and publicly available functional genomics and...l regulatory targets and their direct and indirect interactions. AVAILABILITY: QuIN’s we...
2883 days ago
Kraken: ultrafast metagenomic sequence classification using exact alignments
...e fastest BLAST program. In its fastest mode, Kraken classifies 100 base pair reads at a rate of over 4.1...times faster than the abundance estimation program MetaPhlAn. Kraken is available at http://ccb.jhu.edu/so...2883 days ago
- Kaiju is a program for the taxonomic classific...y comparing it to a reference database containing microbial and viral protein sequences. By default, Kaiju uses either the available c...tabase comprising 4821 microbial genomes. Kaiju can also be used for queryi...
2883 days ago
- ...rived and computationally-predicted interactions. The current release contains 4,433,071 experimentally-de...s and individiual focused studies. All interaction data are freely available in a standardized file f...
2876 days ago
- ...upports SAM format. Other features include support for multiple libraries and an option to estimate insert size distributions from data. Scarpa is available free of charge for acade...
2867 days ago
- ...c application for genome scaffolding of pre-assembled contigs using mate-pair data. It also produces edita...guration file that notably specifies the average insert size of the mate-pair library preprocess allows th...
2867 days ago
- ...is: Easy to use. MEGAN6 is a single application and all features are available through menus, toolbars...quired. Powerful. MEGAN6 allows you to work with hundreds of samples containing hundreds of millions...
2855 days ago
- ..., including variations in sequencing depth, read lengths and mixtures of paired and single-end reads. A mi...20 to 30 genomes are required to get acceptable results, but the method gains power across genomes and pr...
2812 days ago
