Illumina based assembly pipeline steps !
...(Pangolin) Clade assignment, mutation calling and sequence quality checks (Nextclade) Individual variant screenshots with annotation tracks (ASCIIGenome) Intersect variants acro...892 days ago
2019 days ago
Print the screenshot of read coverage remotely !
#Chrom_2:9700000-9760000 ASCIIGenome -ni --fasta A_vaga.NDPD.fasta -r Chrom_2:9700000-9760000 -x "save >> test.pdf" A_vaga.NDPD.fasta.out.sam.bam.sorted.bam1298 days ago
Install asciigenome using conda !
(JitMetaENV) ➜ viruses conda install -c bioconda asciigenome Collecting package metadata (current_repodata.json): / done Solving environment: done ==> WARNING: A newer version of conda exists.1230 days ago
Tags: ASCIIGenome, genome, browser, command, line, interface, designed, running, console, terminals.
2019 days ago
1535 days ago