Results for "Algorithm Analysis"
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...esign Statistical design and analysis of RNA sequencing data. Auer &...latform for visualization and analysis of high-throughput sequence-b...Chromatin immunoprecipation analysis: ChIP-seq ChIP-seq: advantag...package called FSTpoolit for analysis of the resulting sequence rea...3791 days ago
List of bioinformatics open source projects/software.
...b/Software.html Metagenomics analysis software Anduril http://www....ed docking tools Biochemical Algorithms Library (BALL) http://www....cess to more than 150 genomic analysis tools GeWorkbench http://wi...omkappa/ PromKappa (Promoter analysis by Kappa) software program us...3769 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...o benchmark RNA-Seq alignment algorithms and also algorithms that aim to reconstruct diff...m given below is based on the algorithm described in Padhukasahasram...?source=navbarGASP Genometric Analysis Simulation Program. A softwar...odel for population viability analysis (PVA). http://www.vortex9.org...3749 days ago
List of In-silico Binding Site Prediction Tools
...surfaces identified by shape analysis. In this relational database,...we utilize the Smith-Waterman algorithm to footprint an unbound pocke...erred binding sites, the IBIS algorithm clusters binding sites formed...so available enabling further analysis. PROSURFER: http://163.43.140...3756 days ago
Next generation sequencing in R or bioconductor environment
...nductor packages for NGS data analysis, some of them are as follows...cient sequence management and analysis in R. It contains many speed a...g containers, string matching algorithms, and other utilities, for fa...basis for many other sequence analysis packages. Documentation...3636 days ago
Commercial and public next-gen-seq (NGS) software
...xt Generation Sequencing data analysis. JMP Genomics - Next gen visua...GS, microarray, and qPCR data analysis. Streamlined analysis workflow...Short Read, is a mapping and analysis pipeline for short DNA sequenc...pecifically optimized for the analysis of large numbers (millions) o...3531 days ago
- Since few years miRNA has shown to play important role in t...tools related with miRNA: miRNA Sequencing data analysis : http://tools.genxpro.n...w.illumina.com/applications/epigenetics/small_rna_analysis.ilmn More: http://www.bioco...
3508 days ago
Apps for Busy Bioinformatics Researchers !!!
...s an iOS app that allows for the opening and analysis of DNA sequencing files - ab1....android app that allows for the opening and analysis of DNA sequencing files - ab1...unction is predicted using the SNAP and SIFT algorithms and augmented with experime...3553 days ago
- Pathway Analysis is usually performed with aim to en...mechanisms pursue by genes. Pathway Analysis is not only limited to what b...croarrayCourse/Lectures09/Pathway%20Analysis.pdf http://gettinggeneticsdo...help/search/index.html?q=Enrichment+analysis+
3508 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly to the... biologists need to perform some basic analysis: load a table, plot som...eated to perform application specific tasks. e.g. analysis of microarray experiments and...3373 days ago
