RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard s...2948 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a r...ts, MOSAIK employs a hash clustering strategy coupled with the Smith-Waterman algori...2925 days ago
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OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (ht...ffolding. OPERA is based on an exact algorithm that is guaranteed to minimiz...) including refinements to its basic algorithm (to reduce local errors, impr...ript describing the new features and algori...2814 days ago
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Statistical for biological research
There is no disputing the importance of statistical analysis in biological research, bu...nificance column on statistics explains many key statistical and experimental design concepts. Other resources inc...2759 days ago