Results for "Analysis tool"
Top-level pages
List of bioinformatics open source projects/software.
...y-foundation-evolves-into-new-toolkit-net-bio.aspx A language-neutral bioinformatics toolkit built using the Microsoft 4.0...b/Software.html Metagenomics analysis software Anduril http://www...d workflow framework for data analysis Armadillo workflow platform...3761 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...f generic simulation software/tools/resource with brief description...CDPOP is a landscape genetics tool for simulating the emergence of s...?source=navbarGASP Genometric Analysis Simulation Program. A software tool for testing and investigating...3741 days ago
List of In-silico Binding Site Prediction Tools
...g Site Prediction in Proteins tools CASTp : http://sts.bioengr.uic....mely fast and powerful search tool that facilitates exploration of t...rch. Currently it is the only tool that offers this kind of integrat...gi-bin/screen2.cgi is a tool for identifying protein cavit...3748 days ago
Next generation sequencing in R or bioconductor environment
...nductor packages for NGS data analysis, some of them are as follows...GenomicRanges, ShortRead, Rsamtools, etc. Documentation Genomic...ages including ShortRead, Rsamtools, rtracklayer, GenomicFeatures an...ina reads. Documentation Rsamtools Rsamtools provides functions fo...3629 days ago
Commercial and public next-gen-seq (NGS) software
...xt Generation Sequencing data analysis. JMP Genomics - Next gen visualization and statistics tool from SAS. They are working with NCGR to refine this tool and produce others. NextGENe - de...Short Read, is a mapping and analysis pipeline for short DNA sequen...3523 days ago
- ...-transcription levels. Here are some important DBs and tools related with miRNA: miRNA Sequencing data analysis : http://tools.genxpro.net/omiras/ miRNApa...://www.illumina.com/applications/epigenetics/small_rna_analysis.ilmn More: http://www.b...
3500 days ago
Apps for Busy Bioinformatics Researchers !!!
...at allows for the opening and analysis of DNA sequencing files - ab1. It includes handy tools such as "Reverse Complement", "J...at allows for the opening and analysis of DNA sequencing files - ab1. It includes handy tools such as "Reverse Complement"...3545 days ago
- ...isms pursue by genes. Pathway Analysis is not only limited to what b...e products. However, existing tools and dbs mainly based on knowledg...ayCourse/Lectures09/Pathway%20Analysis.pdf http://gettinggeneticsdo...earch/index.html?q=Enrichment+analysis+
3500 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly to the basics of R, focusing on a fe... biologists need to perform some basic analysis: load a table, plot som...reated to perform application specific tasks. e.g. anal...3365 days ago
Software packages for next gen sequence analysis
...xt Generation Sequencing data analysis. * JMP Genomics - Next gen visualization and statistics tool from SAS. They are working with NCGR to refine this tool and produce others. * NextGENe -...ating with Lasergene Sequence Analysis software for additional analy...3247 days ago
