Results for "Analysis tool"
Top-level pages
Comprehensive list of visualization tools for biological pathways
...leading method in -omics data analysis and visualization. Followi...hensive list of visualization tools for biological pathways: BiNA...fo/ BioTapestry Interactive tool for building, visualizing and sha...p://tinyurl.com/vitapad/ Web tools for pathways ArrayXPath&nbs...2291 days ago
Binding Site Prediction in Protein !
...ological functions. In this section we include tools that can assist in prediction of interaction sites on protein surface and tools for predicting the structure...s. PocketPicker Grid-based technique for the analysis of protein pockets. Pocke...2206 days ago
- Reformat is a member of the BBMap/BBTools package. It is a multipurpose tool designed for converting reads or other n...carf (an old Illumina format) bam (if samtools is installed) gzip zip ascii...=y.fa Reformat can be downloaded with BBTools here: https://sourceforge.ne...
2718 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools including alignment, RNA-Seq, DN...lignment, variant calling and analysis of NGS data Supported workfl...ate, save, share, or download analysis pipelines for automated and r...nalysis and genome sequencing tools, integrates over 400 genomic ana...2913 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
... GeneSCF serves as command line tool for clustering the list of genes...e of using GeneSCF over other enrichment tools is that, it performs enrichment analysis in real-time (v1.1 and ab...databases. With command-line versions of tools, as you know you can run mul...2876 days ago
- ...stored in the SAM or BAM file formats. bcftools: a set of companion tools, currently bundled with SAMt...reference genome. See also BAM Format. SAMtools: widely used, open source co...quencing Techniques of nucleotide sequence analysis that increase the range,...
2873 days ago
Genome Assembly Tools and Software - PART1 !!
...re list many genomle assembly tools here. We mainly reported for the...; DNA Sequence Assembly & Analysis DNA Sequence Assembler is...uence assembly , DNA sequence analysis, contig editing, file format...s a prototype genome assembly tool based on maximizing likelihood of...2690 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be execute...s develop algorithms. Pseudocode is a "text-based" detail (algorithmic) design tool. The rules of Pseudocode are...2663 days ago
Awesome perl frameworks, libraries and software - PART 1
... - ack 2.0 is a greplike tool optimized for programmers searchi...rsnapshot/rsnapshot - a tool for backing up your data using rs...eration Sequencing (NGS) data analysis masukomi/jsonpath-perl&n...or High Throughput Sequencing analysis gbarr/perl-libnet -...2493 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated...diagram, resulting from a cladistic analysis, which depicts a hypothetical...methods. ingroup -- In a cladistic analysis, the set of taxa which are hy...es of characters used in a cladistic anal...2466 days ago
