Results for "Analysis tool"
Top-level pages
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
...S is a biologist friendly NGS analysis tool that allows biologists to analyze...ry intuitive workflow for the analysis and visualization of RNA-Seq...ment, Differential expression analysis, Splicing events and gene fus...orts large scale RNA-Seq data analysis too. The tool also supports biological cont...2268 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material betw...in the recipient genome and provide novel function. Following are the popular tool to detect HGT in genomes: T-...854 days ago
Python learning resources for bioinformatics and computational biologist !
...ything, which will be made easy with the right tools/libraries. Professionally, Python is great for backend web development, data analysis, artificial intelligence,...rs have also used Python to build productivity tools, games, and desktop apps, so...2259 days ago
Some useful Bioinformatics links
...6/01/example-gallery-of-nanoplot/ Tool documentation https://broadinsti.../forums/showthread.php?t=26721 samtools(1) manual page http://www.htsli...d-r/ Eval: A software package for analysis of genome annotations | B...arayan/Mail/view Tetra-Nucleotide Analysis (TNA) | BIOiPLUG Help cen...2245 days ago
Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for fur...number of in silico tools have been employed for the t...ptimized methods of combining tool scores, such as Condel and Lo...f new variants. Study of 10 tools on five datasets that such a...letion (CADD)“CADD is a tool for scoring the deleteriousne...2207 days ago
Protein-Protein Interaction Sites Predictions !
The study of Protein–Protein Interactions (PPIs) has a...ical observations. Following are the list of tools commonly used to PPIs predic...ns for proteins with known 3D structure. PFplus A tool for extracting and displaying...2206 days ago
Gap filling or Contigs extensions tools !
There are many tools to perform gap filling using Illumi...with GapFiller". There are also some tools like GAPresolution that can...//www.baseclear.com/landingpages/basetools-a-wide-range-of-bioinformati...particular, take a look at the IMAGE tool: http://genomebiology.com/201...2169 days ago
List of non-commercial NGS genotype-calling software
Meaningful analysis of next-generation sequencing (NG...mple, dbSNP) Package for NGS data analysis, which includes a single indi...ncy spectrum (SFS) estimation Samtools http://samtools.sourceforge.net/ Multi-samp...org/gsa/wiki/index.php/The_Genome_Analysis_Toolkit Multi-sample Alig...2100 days ago
Parallel Processing with Perl !
Here is a small tutorial on how to make best use of multiple processors for bioinformatics analysis. One best way is using perl threads and forks. Knowing how thes...ts which are more than 100GB size. The traditional way to anal...2084 days ago
- The benchmark module is a great tool to know the time the code takes to run. The output is usually in terms of CPU time. This module provides us with a way to optimize our code. With...
2084 days ago
