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Results for "Assembly"

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• • John Parker@parker

  

  Bacterial genome assembly tips using Valvet http://pathogenomics.bham.ac.uk/blog/2009/09/tips-for-de-novo-bacterial-genome-assembly/ #Assembly #NGS #Bacteria #Genome #Tricks #Tips #Velvet

  Tags: Assembly, NGS, Bacteria, Genome, Tricks, Tips, Velvet

  3625 days ago

• • Surabhi Chaudhary@surabhi

  

  Commercial and public next-gen-seq (NGS) software

  Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection, CHiP-seq, browser and other features. Commercial. Wind...

  Tags: Bioinformatics, Computational Biology, NGS, Next generation sequencing, Tools, Software, SNP, Assembly, Pipeline

  3517 days ago

• • Jitendra Narayan@admin

  

  Assemble short reads http://ged.msu.edu/angus/tutorials/short-read-assembly.html #Tutorial #ABySS #Bacteria #Reads #Assembly #Genomics #NGS

  Tags: Tutorial, ABySS, Bacteria, Reads, Assembly, Genomics, NGS

  3619 days ago

• • Rahul Nayak@rahul

  

  Consensus assembly and allele interpretation pipeline. https://github.com/nmdp-bioinformatics/pipeline #Pipeline #Bioinformatics #Assembly

  Tags: Pipeline, Bioinformatics, Assembly

  3395 days ago

• • Jitendra Narayan@admin

  

  Maq: Mapping and Assembly with Qualities http://maq.sourceforge.net/ #Maq #Mapping #Assembly #Qualities

  Tags: Maq, Mapping, Assembly, Qualities

  3581 days ago

• • Jit@jit.aber

  

  The Genome 10K Project

  https://genome10k.soe.ucsc.edu The Genome 10K project aims to assemble a genomic zoo—a collection of DNA sequences representing the genomes of 10,000 vertebrate species, approximately one for every vertebrate genus. The trajectory of cost reduction in DNA sequencing suggests that this project wi...

  Tags: Bioinformatics, Computational Biology, Genetics, Sequencing, G10K, Variant, Assembly, Animal

  3566 days ago

• • Jit@jit.aber

  

  114 different tools out there for DNA/RNA assembly https://twitter.com/kbradnam/status/479039027249971201/photo/1 #Assembly #Genome #Tools

  Tags: Assembly, Genome, Tools

  3566 days ago

• • Jitendra Narayan@admin

  

  Ragout—a reference-assisted assembly tool for bacterial genomes http://bioinformatics.oxfordjournals.org/content/30/12/i302.short #Genome #Assembly #Reference #Ragout #Bacteria

  Tags: Genome, Assembly, Reference, Ragout, Bacteria

  3530 days ago

• • Jitendra Narayan@admin

  

  SAGE: String-overlap Assembly of GEnomes http://www.biomedcentral.com/1471-2105/15/302/abstract #Genome #SAGE #Assembly

  Tags: Genome, SAGE, Assembly

  3518 days ago

• • Jit@jit.aber

  

  Genome assembly algorithms http://www.nature.com/subjects/genome-assembly-algorithms #NGS #Assembly #Algorithms #Genome #Tools

  Tags: NGS, Assembly, Algorithms, Genome, Tools

  3493 days ago

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