Results for "Assess"
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Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) experiments. Hagfish builds on the concept of coverage plots and aims to assis...2904 days ago
- ...e possibility to manually control the scaffolding process. By using the distance information of paired-end and/or matepair data, SSPACE is able to assess the order, distance and orien...
2554 days ago
Genome assembly tutorial "Genome Assembly for short and long reads"
...long read assembler on Pacific Biosciences or Oxford Nanopore data How to improve the accuracy of a long read assembly using short reads How to assess the quality of an assembly...1930 days ago
- ...g SVs with single-base resolution using soft-clipping information. A soft-clipped sequence is an unmatched fragment in a partially mapped read. To assess the performance of ClipCrop w...
1929 days ago
ChIPulate: A Python3 framework to simulate read counts in a ChIP-seq experiment
ChIP-seq simulation pipeline, ChIPulate, we assess the impact of various biological and experimental sources of variation on several outcomes of a ChIP-seq experiment, viz., the recov...1865 days ago
HS3D: Homo Sapiens Splice Sites Dataset
...Sapiens Exon, Intron and Splice regions extracted from GenBank Rel.123. The aim of this data set is to give standardized material to train and to assess the prediction accuracy of co...1420 days ago
