Computer simulation of genetic mechanism !!
...ects/episimsimulator/files/ EvolSimulator A simulation test bed for hypotheses of genome evol...ForwSim The program given below is based on the algorithm described in Padhukasahasram et al. 200...2970 days ago
2155 days ago
Public Databases for Bioinformatics !
...p;https://www.encodeproject.org/files/ENCFF446WOD/@@download/ENCFF446WOD.bed.gz, https://www.encodepr...anford.edu/kundaje/akundaje/release/blacklists/hg38-human/hg38.blacklist.bed.gz. The human genome version...1134 days ago
3003 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...genomics. http://egglib.sourceforge.net/EvolSimulator A simulation test bed for hypotheses of genome evol...rch.shtmlForwSim The program given below is based on the algorithm described in Padhukasahasram et al. 200...3732 days ago
Commercial and public next-gen-seq (NGS) software
...on Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data. (C++) SISSRs - Site Identification from Short Sequence Reads. BED file input. Raja Jothi @ NIH....3514 days ago
ArrayGen Next Generation Genome Browser Coming Soon !!!
...cing data analysis. It is platform independent and much simpler to use. The main features are, it supports many standard file formats such as GFF, BED, GTF, FASTA, VCF, BAM and it...3071 days ago
3737 days ago
2070 days ago
2014 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
...e technologies to generate variant calls and regions for use in benchmarking and validating variant calling pipelines. Currently, benchmark VCF and BED files for small variants are...1555 days ago
2132 days ago