1630 days ago
How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several perl modules and dependenci...king. Following are the error message when CPAN module is not installed.# cpan-bash: cpa...3960 days ago
3950 days ago
Bioinformatics software for biologists in the genomics era
The genome sequencing revolution is approaching a landmark figure of 1000 completel...ormaticians, so a gap exists between the user-friendly software needed and the scripting/programming infrastructure of...3797 days ago
3009 days ago
Keep Your Important SSH Session Running when You Disconnect from Server !!!
As a Bioinformatician/ Computational biologist we swim in the ocean of genomic/proteomics data, and play with the...are, tools such as tmux ( http://tmux.sourceforge.net/, nohup (http://ss64.com/bash/nohu...3714 days ago
Linux Sort Commands for Bioinformatics
Almost all the scripting languages such as Perl, Python etc have built-in sort, but unfortunately none of them are as flexible as sort command. But one when it come to space eff...3637 days ago
3958 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...tory analysis, from Lex Nederbragt Tutorials for bash shell scripting A tutorial at linuxconfig.org A Getting Started With Bash tutorial at hypexr.org Mendel Cooper's Advanced Bash Shell-Scripting Guide Tutorials for sed, t...3790 days ago
3959 days ago
Researcher in computer science/biology
Researcher in Computer Science at the Computational Biology Unit - temporary employ...is of data from high-throughput molecular experiment. Basic programming or scripting skills are required. Experien...3957 days ago
PHP Tutorial 1 - Introduction (PHP For Beginners)
In this tutorial we go over a short presentation on what PHP is, what is required t...ring further down the line. This video will hopefully introduce you to the PHP scripting language and get you interest...3659 days ago
BASH script for SelfBLAST a genome
#!/bin/bash #self BLAST a genome -- Expecting you have blast and samtools installed in your system #Author: Jitendra Narayan #USAGE: ./selfBlast.sh extract #USAGE...2662 days ago
Download the genome from NCBI using bash script/command
#!/bin/bash # Download the genome from NCBI using command # Create a Directory mkdir genome cd genome # Look for genome assembly summary and extract the URL...2542 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Enginee...u tell next generation bioinformaticians? Bioinformatics is not all about scripting and researchers who study in...2372 days ago
3963 days ago
3956 days ago
Skills: Sequencing Data Analysis, R Programming, Python, Php + Mysql + JQuery, Bash Scripting
1630 days ago