3961 days ago
Phylogenetic for Bioinformatics
...genetics.pdf Phylogenetic Tree Computation Tutorial Overviewhttp://pga.lbl.gov/Workshop/April2002/lectures/Olken.pdf MrBayes: A program for the Bayesian inference of phylogenyhttp://...3961 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ved methodologies to detect and characterize protein-DNA interactions. Furey, Nat Rev Genet 13: 840–852, 2012 Publisher Web Site MuMoD: a Bayesian approach to detect multiple m...3794 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...ware/tools/resource with brief description and homepage ALF A Simulation Framework for Genome Evolution http://www.cbrg.ethz.ch/alfBayesian Serial SimCoal Bayesian Serial SimCoal, (BayeSSC) is...3752 days ago
Next generation sequencing in R or bioconductor environment
...hIP-Seq experiments. Its algorithm uses hidden Markov models (HMM) and Bayesian statistical methods. The foll...rior information to discriminate closely adjacent binding events via a Bayesian hierarchical t-mixture model....3639 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...chromosome orders) Output: VCF Bassovac Description: Improved Bayesian inversion somatic caller; unl...-processing Output: pair of VCF files Triodenovo Description: Bayesian framework for calling de novo...2923 days ago
Ancestral sequence reconstruction steps !
...ut file -> arquivo.tre) These steps above, I call of pre-processing to inferences phylogenetic... 5- Perform phylogenetic tree, used Bayesian Inference with Molecular Cloc...2193 days ago