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Results for "Bed"

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• • Rahul Nayak@rahul

  

  make a window of 60k of bed file. $ bedtools makewindows -g genome -w 60000 > 60K.windows.bed #bed #bin #window

  Tags: bed, bin, window

  1946 days ago

• • Rahul Nayak@rahul

  

  Merge overlapping bed file https://bedtools.readthedocs.io/en/latest/content/tools/merge.html #bed #merge #overlapping

  Tags: bed, merge, overlapping

  1946 days ago

• • Jit@jit.aber

  

  Get the fasta sequence of the coordinates http://bedtools.readthedocs.io/en/latest/content/tools/getfasta.html #Fasta #Bed #Coordinates #Bedtools

  Tags: Fasta, Bed, Coordinates, Bedtools

  2619 days ago

• • Rahul Nayak@rahul

  

  Get the sequences using coordinates in bed file. $ bedtools getfasta -fi input_file.fa -bed regions_file.bed #Bed #Extract #Sequence #bedtools

  Tags: Bed, Extract, Sequence, bedtools

  2248 days ago

• • Neelam Jha@neelam

  

  BAM2BED conversion bamToBed -i overall_exp_genome_rep1.bam > alignment.bed #Bed #bam #bamToBed #convert

  Tags: Bed, bam, bamToBed, convert

  2030 days ago