Set up WGD environment using conda !
#Wgd cannot be installed directly with bioconda at present, so it is slightly troubles...version of conda exists. =1.16 in /home/urbe/anaconda3/envs/wgd/lib/python3.7/site-packages (from wgd==1.2) (1.1...1214 days ago
Command line to create blast uniref database !
#The NCBI BLAST+ distribution does not include 'blastpgp', it has been replaced by the...BI BLAST package (no longer supported), which is available from the NCBI's FTP site: ftp://ftp.ncbi.nlm.nih.gov/b...960 days ago
Run Pango on your multifasta file !
#More at https://cov-lineages.org/resources/p...anaconda3/envs/pangolin/lib/python3.8/site-packages/pangoLEARN/data/deci...anaconda3/envs/pangolin/lib/python3.8/site-packages/pangoLEARN/data/deci...anaconda3/envs/pangolin/lib/python3.8/site-packages/sklearn/base.py:438:...897 days ago