Awesome bioinformatics pipelines !
A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipeline2970 days ago
QUAST: quality assessment tool for genome assemblies
QUAST evaluates genome assemblies. For metagenomes, please see MetaQUAST project.It can works bot...comparison. More at http://bioinf.spbau.ru/quast http://bioinformatics.oxfordjournals.org/content/early/2013/03/09/bioi...2963 days ago
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RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archa...o make RAST a more useful research tool and to keep pace with advancements in bioi...2942 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignments, and then keeps only the pa...0). Genome-wide synteny through highly sensitive sequence alignment: Satsuma. Bioi...2927 days ago
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Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinformatics jobs that consist of a series of processing st...(Google Group) Bpipe has been published in Bioinformatics! If you use Bpipe, please cit...lack A, Bpipe: A Tool for Running and Managing Bioi...2918 days ago
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